BIOSTATS + AI · DECISION SCIENCE · HUMAN JUDGMENT

Augment Intelligence. Retain Accountability.

Ye (Lennon) Li PhD · P.Stat.

Biostats + AI combines statistical rigor and machine intelligence to strengthen evidence-based human decisions. AI supports reasoning and evaluates alternatives; people retain final decision authority and accountability for consequences.

evidence / quantitative + semantic
uncertainty: carried forward
model authority: bounded
decision: human-owned

One reality. Many perspectives.

INTERACTIVE / 30 SECONDS

A prediction is not a decision.

Change the probability, sensitivity range, and costs of error. See when the preferred action changes across assumptions; a threshold crossing does not establish that review is optimal.

ADJUST THE ASSUMPTIONS
Try changing these three variables
42%
0Probability, 0–100%100
±12 pp
00–30 percentage points30
3 units
11–10 relative units10
ILLUSTRATIVE DECISION EVIDENCE
Plausible range30–54%
Action threshold40.0%
0%25%50%75%100%
Illustrative rangeEstimateThreshold
What this suggests

Human review needed

The illustrative uncertainty range crosses the threshold; human review is needed.

Illustrative guidance: Human review needed
HUMAN DECISION / REVIEWABLE CHOICE

The system's guidance is not the final decision.

Choose an action and optionally record why. This educational demo shows your choice locally in the page; it does not store or transmit your input.

No human decision recorded yet.

Investigation is not an optimized third action here: its value depends on investigation costs, information reliability, and the subsequent decision it could change. A deployed system would also track authorization, outcomes, and retrospective evaluation.

Educational example, not a recommendation for any real-world decision. Values and the ± range are invented, not statistically calibrated predictions or confidence intervals. You set the relative missed-event cost; a fixed false-alarm cost of 2 yields the expected-loss threshold. Real decisions require validated evidence, context, and human judgment.

01 — From evidence to decision

Most real-world problems become decisions.

Should we investigate, release, delegate, disclose, continue, or stop? Classification and prediction inform these choices, but action also depends on alternatives, constraints, uncertainty, costs, and consequences.

01 / Quantify

Quantify evidence

Statistical models turn observations into explicit estimates, forecasts, comparisons, and uncertainty. Assumptions and validation remain visible rather than disappearing behind a single score.

02 / Interpret

Interpret and reason

Not every useful input is numeric. Semantic models interpret context; interactive LLMs help frame questions, surface competing explanations, challenge assumptions, and translate evidence without acquiring decision authority.

03 / Decide

Evaluate the decision

Compare actions, asymmetric errors, opportunity costs, and the value of more information. Evaluate whether AI improves final decisions over simpler baselines; people retain authority and accountability.

Operating principle
Uncertainty should travel with the answer.

The system should preserve enough evidence for a person to understand what supports a recommendation, what remains unknown, and when not to act.

Data are projections of reality.Models are projections shaped by data and assumptions.Reality is larger than both.

02 — Decision-system method

Frame, deliberate, decide as a human—and evaluate consequences.

The method travels across privacy, scientific review, investigation, model delegation, resource allocation, and stopping decisions. An LLM supports iterative reasoning and explanation; calculations, constraints, and validation remain inspectable.

01

Decision

What choice, escalation, forecast, review, or action does the system need to support? What would count as useful evidence?

defined
02

Evidence

What quantitative and semantic evidence is available? What is missing, biased, unsafe to expose, or outside the observed data?

bounded
03

Models + uncertainty

Use the right statistical, computational, or semantic models; validate them; compare alternatives; and carry uncertainty, disagreement, and abstention forward.

evaluated
04

Deliberate and evaluate

Use interactive AI to question assumptions and explain trade-offs; compare costs and consequences, keep the human decision explicit, then test decision quality, calibration, and review burden against baselines.

human-owned
DECISION LOOP / HUMAN IN THE SYSTEM

The human is part of the system—not an approval button outside it.

Statistics and AI provide evidence, reasoning, alternatives, and consequence analysis. People define goals and value trade-offs, challenge assumptions, decide whether to act, investigate, defer, or stop, and remain accountable for their decisions and consequences. The system should preserve the rationale, human authorization, feedback, and opportunities to reassess.

Accountability is shared, not transferred: developers, deploying organizations, and governance bodies also retain responsibility for design, validation, oversight, and conditions of use.

Better automation is useful. Better judgment and clear accountability are the objectives.

RESEARCH QUESTION / NOT YET VALIDATED

Can biostatistics, AI, and human judgment together improve decisions?

This is a hypothesis to test, not a result already established. Existing tools and interactive examples demonstrate methods and functionality; they do not yet establish improved real-world decision outcomes.

BUILT

Methods and prototypes

Statistical models, software tools, rules and semantic processing, and interactive hypothetical decisions. Demonstrated functionality is not demonstrated effectiveness.

TO BE EVALUATED

Compare against simple baselines

Compare rules, statistical models, and AI-assisted approaches on calibration, decision loss, cost, review burden, and human-system performance.

NOT YET KNOWN

Real-world decision value

We do not claim AI has improved actual decision outcomes. Positive, negative, and inconclusive findings should all be reported transparently.

03 — Existing work, one theme

Decision science in practice.

I explore the same questions across public-health investigation, scientific software, privacy and AI access, and efficient model delegation. These are domain-specific research and engineering examples—not claims of a universal validated decision engine.

Flagship / PAGe

Forecast what is still unfolding—and keep the uncertainty visible.

PAGe is a phase-aligned infectious-disease forecasting system. It treats forecasting as a decision-support problem: detect the emerging phase, estimate what may happen next, preserve probabilistic uncertainty, and provide evidence a person can interpret rather than a single opaque prediction.

biostatisticsforecastingprobabilistic evidencevalidationhuman interpretation
Quantitativestatistical forecasting
Probabilisticuncertainty retained
Validatedout-of-sample evaluation
Humandecision support, not autopilot

PAGe v3 is shadow-only, not an operational clinical forecasting service.

PROJECT PROOF

Four projects. One evidence-to-decision approach.

Scientific forecasting, decision gating, privacy-aware AI, and reproducible engineering. Inspect working evidence and the methods behind each system.

01 / PROJECT WORK

PAGe · Scientific forecasting

Forecasting one and two weeks ahead with expert-reviewed epidemic ignition, staged model training, frozen artifacts, and holdout checks. The current v3 is shadow-only.

CAPABILITY DEMONSTRATED

Scientific modeling · gated evaluation · reproducibility

02 / DECISION GATING · RESEARCH PROTOTYPE

Cranary · Evidence before release

An evidence-backed R package screener that separates deterministic checks, bounded semantic review, and human release decisions. A finding can require action, review, or remain unknown; AI cannot override an unresolved rule or certify CRAN acceptance.

BENCHMARKING THE GUARDRAILS

Historical and current CRAN package versions, documented issue→fix pairs, and held-out controls test whether risk findings are useful and change when defects are resolved. Longitudinal scores and wider package benchmarks are being developed—not yet validated as general rankings.

Active development · source currently privateEvaluation method ↗
03 / PROJECT WORK

DataGangeR · Safer AI development

An R package that makes local synthetic stand-ins for data-sensitive workflows. Users review sensitive fields, fidelity, and disclosure warnings before export. No anonymity guarantee.

CAPABILITY DEMONSTRATED

Statistical engineering · privacy review · agent handoff

04 / PROJECT WORK

ONgeoR · Geography you can audit

Retrieves authoritative Ontario and census boundaries, links locations to public-health regions, records sources, and offers a Shiny interface that exports reproducible R code.

CAPABILITY DEMONSTRATED

Geospatial engineering · provenance · usable tools

Project descriptions reflect their published documentation. Operational fitness requires independent evaluation.

Decision systems

evidence → action

PAGe supports infectious-disease forecasting. Which explores explicit decision and evaluation layers for calibration, abstention, model comparison, and semantic evidence. aiR supports statistical analysis while keeping assumptions and interpretation with the analyst. The SSC Review Agent applies retrieved evidence and structured rubrics while leaving final decisions to human reviewers.

Trust + control infrastructure

bounded AI

DataGangeR reduces unnecessary exposure of source data through synthetic stand-ins. HMA binds evidence and approvals to workflow stages. AgentPorter constrains what agents can access and execute. clientAgent turns requests into reviewable candidate artifacts without giving agents release authority.

Reproducible evidence systems

provenance + validation

OPCC and ONgeoR make public-health linkage and geography reproducible and source-documented. Cranary explores evidence-backed package screening, bounded AI review, and human-gated release decisions, using CRAN package-version benchmarks to test its findings. These systems make the evidence trail inspectable and reusable instead of leaving it implicit in one-off analysis.

AI expands what can be represented—not what should be trusted automatically.

Statistics contributes explicit assumptions, calibration, validation, and uncertainty. Semantic AI contributes a way to work with evidence that is difficult to encode as conventional variables. Workflow controls preserve provenance, boundaries, and review.

The common design question is therefore not Which model is smartest? It is What evidence supports this decision, what remains uncertain, when should the system abstain, and who has authority to act?

evidence?calibration?uncertainty?abstain?provenance?authority?
04 — WORKING SOFTWARE

Try the tools—not just the descriptions.

Public demos of statistical workflows and decision-facing interfaces. Use synthetic or public-safe data only.

Biostats.AI Demo LabOpen in a new tab ↗
Lab Testing ToolkitOpen in a new tab ↗
ONgeoR Interactive MapOpen in a new tab ↗

Data boundary: Never upload personal, patient, confidential, or client-owned information to public demos. Read the privacy notice. ONgeoR: source · documentation.

HOW I THINK

What the models cannot see.

Biostats + AI joins quantitative discipline with new ways to interpret and discuss evidence. Daoist and Buddhist thought remind me that every model is partial, conditions change, and confident descriptions are not reality.

A useful model is not the whole truth. A convincing AI answer is not a decision.

My work keeps the trail from observation to interpretation visible: evidence, assumptions, uncertainty, privacy boundaries, and human responsibility.

What remains unseen

The reality that can be modeled is not the whole reality.

The point is not to eliminate uncertainty. It is to see more clearly, know the limits of what we see, test alternatives, recognize bias, and remain open to what our models have left out.

Observe carefully. Model humbly. Decide consciously.